Query= gi|9626732|ref|NC_001489.1| Hepatitis A virus, complete
genome
(7478 letters)
>gi|21326584|ref|NC_003977.1| Hepatitis B virus, complete genome
Length = 3215
Score = 23.8 bits (14), Expect = 1.7
Identities = 15/16 (93%)
Strand = Plus / Plus
Query: 4811 caaaaatcctcacaat 4826
||| ||||||||||||
Sbjct: 222 caagaatcctcacaat 237
Score = 23.8 bits (14), Expect = 1.7
Identities = 15/16 (93%)
Strand = Plus / Plus
Query: 6939 ccagttttcttttgtc 6954
||| ||||||||||||
Sbjct: 803 ccaattttcttttgtc 818
Score = 22.2 bits (13), Expect = 5.0
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 6887 tattaataatgtc 6899
|||||||||||||
Sbjct: 2577 tattaataatgtc 2565
Lambda K H
1.10 0.333 0.549
Gapped
Lambda K H
1.10 0.333 0.549
Matrix: blastn matrix:1 -1
Gap Penalties: Existence: 5, Extension: 1
Number of Hits to DB: 13
Number of Sequences: 0
Number of extensions: 13
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 3215
length of database: 7478
effective HSP length: 27
effective length of query: 3188
effective length of database: 7451
effective search space: 23753788
effective search space used: 23753788
T: 0
A: 0
X1: 7 (11.1 bits)
X2: 18 (28.5 bits)
S1: 14 (23.8 bits)
S2: 13 (22.2 bits)